Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825128.1_cds_XP_016502214.1_15879
CDS Infomation

[gene=LOC107820441] [db_xref=GeneID:107820441] [protein=phospholipase D alpha 1-like] [protein_id=XP_016502214.1] [location=join(93237..93329,96627..98523,98980..99413)] [gbkey=CDS]
Sequence

ATGGCACAAATTCTGCTACATGGTACTCTTCATGCTACTATATTCGAGGTCGATAAAATC
CATACTAATTTTGGCAAAGAACTTTTCAATAAGGTGGTGCATGGCATTGAGGGAGCAATT
GGCTTCAGTAAGACAGCCTCAAGACTATATGCAACCATTGATCTTCAAAAAGCCAGAGTT
GGCAGAACAAGATTGCTGAATGAACACAAAAATCCGCGGTGGTACGAGTCTTTCCACATT
TACTGTGCTCATATGGCTGCAGATGTTATATTCACTGTCAAAATTGATAATCCAATTGGA
GCAGAACTCATTGGTAGAGCTTACTTGCCAGTTCAAGAACTACTAGATGGAGAAGAAGTC
GATAAATGGCTTGAAATCCTCGATACAGAACGAAAACCTGTGCATGGACACTCTAAAATT
CATGTGAAGTTGCAGTTTTTTGATGTCACAAGGGAATATAATTGGAATAGAGGGATAAAA
GTAACAAGATTTCCTGGTGTTCCTTACACATTTTTTAGTCAAAGACAAGGATGCAAAGTC
ACACTTTACCAAGATGCTCATGTTCCTGATAACTTCATCCCGAAAATCCCTCTTGCTGGT
GGAAAGTTTTACGAGCCACAACGATGCTGGGAAGATATTTTCGATGCTATAACGAATGCA
AAGCACTTGATTTACATAACAGGATGGTCTGTATATACTGAGATCACTTTGATAAGGGAC
ACAAGGAGGCCTAAACCTGGTGGAGACATAACGCTCGGGGAGTTGCTTAAGAAAAAAGCT
AATGAAGGTGTGAGAGTTCTAATGCTGGTTTGGGATGATAGAACATCGGTTGGTGTGTTG
AAACAAGATGGACTAATGGCTACTCATGATGAAGAAACTGCTAATTTTTTCCGAGATACT
GAAGTCAATTGTGTGTTGTGTCCTCGAAATCCTGATGATGGACGGAGCATTATTCAGAAT
ATAGAAATCGGGACAATGTTCACTCATCATCAGAAGATTGTTGTTGTGGATGGTGAAATG
CCTAATGGAGACAAAGAGAAGAGGAGAATTGTGAGTTATATTGGTGGGATTGATCTTTGT
GATGGTAGATATGATACACAATTTCACTCCCTTTTTAGGACATTGGACACAGCACATCAT
GATGATTTTCACCAAGCAAATTTCACTGGTGCATCAATACAAAAAGGGGGACCAAGAGAG
CCTTGGCACGATATACATTGTCGATTAGAAGGGCCAGTTGCTTGGGATGTACTGTACAAT
TTTGAGCAGAGGTGGAGGAAGCAAGGAGGAAAGGACTTGCTTATAAACCTAAGGGATATC
GACAACATTATCACTCCACCTTCACCTGTTATGTATCCAGACGATCATGACACGTGGAAT
GTTCAAGTTTTTCGATCAATTGATGGGGGAGCAGCTTTCGGCTTCCCTAATGTTCCTGAG
GAGGCAGCAAAGTCTGGCCTTATAAGTGGAAAGGACAACATCATTGACCGAAGCATACAG
GACGCATATATTAATGCCATTCGTAGAGCAAAGCATTTCATCTACATCGAAAACCAGTAC
TTCTTAGGTAGCTCTTTTTCGTGGTACTCTAATGATATCAAGGATGAAGAGATCAATGCT
TTGCACTTGATCCCAAAGGAGCTGTCTTTGAAGATAGTGAGCAAAATCGAAGCAGGGGAA
AGGTTTACGGTTTATGTTGTGCTTCCAATGTGGCCAGAAGGACTTCCTGAGAGTGGATCT
GTACAAGCAATACTGGATTGGCAGAGGAGGACTATGCGAATGATGTACACCGATATAATT
CAAGCTCTAAAAGTAAAGGGAATTATAGCAAATCCAAAGGAATACTTGAGTTTCTTTTGC
CTTGGCAATAGGGAAACAAAAAAGGGAGGAGAATATGAGCCTTCTGAGACACCAGAACCT
GATTCAGACTATAGTAGAGCTCAAGAAGCCAGGCGTTTCATGATTTACGTGCATGCCAAA
ATGATGATAGTGGATGATGAATACATTATCATTGGATCAGCAAACATAAACCAAAGGTCA
ATGGATGGAGCAAGAGATTCAGAAATAGCAATGGGAGCTTACCAACCATTTCATTTATCA
GTAAAGGAGCCAGCTAGGGGTCAAGTTCATGGTTTCAGAATGGCATTGTGGTATGAACAC
TTGGGCCTGTTAGATAACAGTTTTCTTTATCCAGAGAGCCCCGAATGCATCCGAAAAGTG
AACCAAGTTGCTGATAAATATTGGGATTTGTATTCAAGTGAGAGCCTGGTTCATGATTTG
CCTGGCCACTTGCTTACTTACCCTATTGCTGTGACTGAAAATGGAGAGGTCACTGAACTA
CCTGGAACAGAATACTTCCCTGACACCAAGGCTCGAGTTCTCGGTACCAAATCTGATTTT
CTTCCTCCCATTCTTACTACTTAA

Peptide Sequence

PEP ID

XP_016502214.1
PEP Infomation

PREDICTED: phospholipase D alpha 1-like [Nicotiana tabacum]
Sequence

MAQILLHGTLHATIFEVDKIHTNFGKELFNKVVHGIEGAIGFSKTASRLYATIDLQKARV
GRTRLLNEHKNPRWYESFHIYCAHMAADVIFTVKIDNPIGAELIGRAYLPVQELLDGEEV
DKWLEILDTERKPVHGHSKIHVKLQFFDVTREYNWNRGIKVTRFPGVPYTFFSQRQGCKV
TLYQDAHVPDNFIPKIPLAGGKFYEPQRCWEDIFDAITNAKHLIYITGWSVYTEITLIRD
TRRPKPGGDITLGELLKKKANEGVRVLMLVWDDRTSVGVLKQDGLMATHDEETANFFRDT
EVNCVLCPRNPDDGRSIIQNIEIGTMFTHHQKIVVVDGEMPNGDKEKRRIVSYIGGIDLC
DGRYDTQFHSLFRTLDTAHHDDFHQANFTGASIQKGGPREPWHDIHCRLEGPVAWDVLYN
FEQRWRKQGGKDLLINLRDIDNIITPPSPVMYPDDHDTWNVQVFRSIDGGAAFGFPNVPE
EAAKSGLISGKDNIIDRSIQDAYINAIRRAKHFIYIENQYFLGSSFSWYSNDIKDEEINA
LHLIPKELSLKIVSKIEAGERFTVYVVLPMWPEGLPESGSVQAILDWQRRTMRMMYTDII
QALKVKGIIANPKEYLSFFCLGNRETKKGGEYEPSETPEPDSDYSRAQEARRFMIYVHAK
MMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPFHLSVKEPARGQVHGFRMALWYEH
LGLLDNSFLYPESPECIRKVNQVADKYWDLYSSESLVHDLPGHLLTYPIAVTENGEVTEL
PGTEYFPDTKARVLGTKSDFLPPILTT

Transcript Sequence

Gene sequence data has not been registered.